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Implementation of the Genomic Annotation & Interpretation Application (GAIA) Platform in a Diagnostic Genomics Laboratory

Finalist | Contributing to better health and justice systems Bioinformatics Team: Randwick Genomics Laboratory, Prince of Wales

The clin­i­cal inter­pre­ta­tion of genomics data has become a key method­ol­o­gy in genom­ic diag­nos­tics and the deliv­ery of accu­rate and time­ly patient reports.

The bioin­for­mat­ics group at Rand­wick genomics has designed and imple­ment­ed an accred­it­ed clin­i­cal diag­nos­tic genom­ic analy­sis appli­ca­tion (GAIA) – a com­pre­hen­sive web-based anno­ta­tion, fil­tra­tion and visu­al­iza­tion plat­form. It pro­vides vari­ant pri­or­i­ti­za­tion, data stor­age and qual­i­ty con­trol of data from panels/exomes/genomes.

GAIA has enabled the pro­vi­sion of 7,724 patient reports. This includes 1800 defin­i­tive results for patients with rare dis­ease or pre­na­tal diag­noses, and 3075 research reports. GAIA has facil­i­tat­ed the iden­ti­fi­ca­tion of 29 nov­el genes in neu­rocog­ni­tive and oth­er Mendelian dis­or­ders. The cre­ation of a robust, easy to use and rapid genom­ic pipeline that can deliv­er diag­noses with­in min­utes of use improves access to our lifechang­ing clin­i­cal genet­ics services.

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